Package: speaq
Version: 2.7.0
Date: 2022-05-20
Title: Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment,
        Peak Based Processing, Quantitative Analysis and Visualizations
Author: Charlie Beirnaert, Trung Nghia Vu, Pieter Meysman, Kris Laukens
        and Dirk Valkenborg
Maintainer: Charlie Beirnaert <charlie_beirnaert@icloud.com>
Description: Makes Nuclear Magnetic Resonance spectroscopy (NMR
        spectroscopy) data analysis as easy as possible by only
        requiring a small set of functions to perform an entire
        analysis. 'speaq' offers the possibility of raw spectra
        alignment and quantitation but also an analysis based on
        features whereby the spectra are converted to peaks which are
        then grouped and turned into features. These features can be
        processed with any number of statistical tools either included
        in 'speaq' or available elsewhere on CRAN. More details can be
        found in Vu et al. (2011) <doi:10.1186/1471-2105-12-405> and
        Beirnaert et al. (2018) <doi:10.1371/journal.pcbi.1006018>.
Depends: R (>= 3.1.0),
Imports: MassSpecWavelet, cluster, parallel, doSNOW, data.table,
        foreach, stats, Rfast, utils, graphics, grDevices, ggplot2,
        gridExtra, reshape2, rvest, xml2, missForest, impute
Suggests: datasets, knitr, rmarkdown, grid, gridBase
LazyData: true
VignetteBuilder: knitr
License: Apache License 2.0
RoxygenNote: 7.2.0
Encoding: UTF-8
Config/pak/sysreqs: make libicu-dev libxml2-dev libssl-dev
Repository: https://beirnaert.r-universe.dev
Date/Publication: 2022-05-20 12:27:18 UTC
RemoteUrl: https://github.com/beirnaert/speaq
RemoteRef: HEAD
RemoteSha: 3fa92499b7d2c5c98a0bb7837f173ab0c5f7d1b3
NeedsCompilation: no
Packaged: 2026-07-07 08:50:47 UTC; root